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2021-03-19Merge branch 'jc/calloc-fix'Libravatar Junio C Hamano1-1/+1
Code clean-up. * jc/calloc-fix: xcalloc: use CALLOC_ARRAY() when applicable
2021-03-15xcalloc: use CALLOC_ARRAY() when applicableLibravatar Junio C Hamano1-1/+1
These are for codebase before Git 2.31 Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-09-29Merge branch 'tb/bloom-improvements'Libravatar Junio C Hamano1-1/+3
"git commit-graph write" learned to limit the number of bloom filters that are computed from scratch with the --max-new-filters option. * tb/bloom-improvements: commit-graph: introduce 'commitGraph.maxNewFilters' builtin/commit-graph.c: introduce '--max-new-filters=<n>' commit-graph: rename 'split_commit_graph_opts' bloom: encode out-of-bounds filters as non-empty bloom/diff: properly short-circuit on max_changes bloom: use provided 'struct bloom_filter_settings' bloom: split 'get_bloom_filter()' in two commit-graph.c: store maximum changed paths commit-graph: respect 'commitGraph.readChangedPaths' t/helper/test-read-graph.c: prepare repo settings commit-graph: pass a 'struct repository *' in more places t4216: use an '&&'-chain commit-graph: introduce 'get_bloom_filter_settings()'
2020-09-17bloom: use provided 'struct bloom_filter_settings'Libravatar Taylor Blau1-0/+1
When 'get_or_compute_bloom_filter()' needs to compute a Bloom filter from scratch, it looks to the default 'struct bloom_filter_settings' in order to determine the maximum number of changed paths, number of bits per entry, and so on. All of these values have so far been constant, and so there was no need to pass in a pointer from the caller (eg., the one that is stored in the 'struct write_commit_graph_context'). Start passing in a 'struct bloom_filter_settings *' instead of using the default values to respect graph-specific settings (eg., in the case of setting 'GIT_TEST_BLOOM_SETTINGS_MAX_CHANGED_PATHS'). In order to have an initialized value for these settings, move its initialization to earlier in the commit-graph write. Signed-off-by: Taylor Blau <me@ttaylorr.com> Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-09-17bloom: split 'get_bloom_filter()' in twoLibravatar Taylor Blau1-1/+2
'get_bloom_filter' takes a flag to control whether it will compute a Bloom filter if the requested one is missing. In the next patch, we'll add yet another parameter to this method, which would force all but one caller to specify an extra 'NULL' parameter at the end. Instead of doing this, split 'get_bloom_filter' into two functions: 'get_bloom_filter' and 'get_or_compute_bloom_filter'. The former only looks up a Bloom filter (and does not compute one if it's missing, thus dropping the 'compute_if_not_present' flag). The latter does compute missing Bloom filters, with an additional parameter to store whether or not it needed to do so. This simplifies many call-sites, since the majority of existing callers to 'get_bloom_filter' do not want missing Bloom filters to be computed (so they can drop the parameter entirely and use the simpler version of the function). While we're at it, instrument the new 'get_or_compute_bloom_filter()' with counters in the 'write_commit_graph_context' struct which store the number of filters that we did and didn't compute, as well as filters that were truncated. It would be nice to drop the 'compute_if_not_present' flag entirely, since all remaining callers of 'get_or_compute_bloom_filter' pass it as '1', but this will change in a future patch and hence cannot be removed. Signed-off-by: Taylor Blau <me@ttaylorr.com> Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-07-30t: make test-bloom initialize repositoryLibravatar brian m. carlson1-0/+2
The bloom filter code relies on reading object IDs using parse_oid_hex. In order to make that work with an appropriate size, we need to have initialized the repository's hash algorithm. Since the values we're processing depend on the repository in use, let's set up the repository when we run the test helper. Signed-off-by: brian m. carlson <sandals@crustytoothpaste.net> Reviewed-by: Eric Sunshine <sunshine@sunshineco.com> Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-05-14Merge branch 'ds/bloom-cleanup'Libravatar Junio C Hamano1-1/+1
Code cleanup and typofixes * ds/bloom-cleanup: completion: offer '--(no-)patch' among 'git log' options bloom: use num_changes not nr for limit detection bloom: de-duplicate directory entries Documentation: changed-path Bloom filters use byte words bloom: parse commit before computing filters test-bloom: fix usage typo bloom: fix whitespace around tab length
2020-05-07bloom: fix `make sparse` warningLibravatar Đoàn Trần Công Danh1-1/+1
* We need a `final_new_line` to make our source code as text file, per POSIX and C specification. * `bloom_filters` should be limited to interal linkage only Signed-off-by: Đoàn Trần Công Danh <congdanhqx@gmail.com> Signed-off-by: Ramsay Jones <ramsay@ramsayjones.plus.com> Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-05-01test-bloom: fix usage typoLibravatar Derrick Stolee1-1/+1
Signed-off-by: Derrick Stolee <dstolee@microsoft.com> Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-23test-bloom: check that we have expected argumentsLibravatar Jeff King1-4/+16
If "test-tool bloom" is not fed a command, or if arguments are missing for some commands, it will just segfault. Let's check argc and write a friendlier usage message. Signed-off-by: Jeff King <peff@peff.net> Reviewed-by: Taylor Blau <me@ttaylorr.com> Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-23test-bloom: fix some whitespace issuesLibravatar Jeff King1-5/+5
Signed-off-by: Jeff King <peff@peff.net> Reviewed-by: Taylor Blau <me@ttaylorr.com> Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-04-06commit-graph: reuse existing Bloom filters during writeLibravatar Garima Singh1-1/+1
Add logic to a) parse Bloom filter information from the commit graph file and, b) re-use existing Bloom filters. See Documentation/technical/commit-graph-format for the format in which the Bloom filter information is written to the commit graph file. To read Bloom filter for a given commit with lexicographic position 'i' we need to: 1. Read BIDX[i] which essentially gives us the starting index in BDAT for filter of commit i+1. It is essentially the index past the end of the filter of commit i. It is called end_index in the code. 2. For i>0, read BIDX[i-1] which will give us the starting index in BDAT for filter of commit i. It is called the start_index in the code. For the first commit, where i = 0, Bloom filter data starts at the beginning, just past the header in the BDAT chunk. Hence, start_index will be 0. 3. The length of the filter will be end_index - start_index, because BIDX[i] gives the cumulative 8-byte words including the ith commit's filter. We toggle whether Bloom filters should be recomputed based on the compute_if_not_present flag. Helped-by: Derrick Stolee <dstolee@microsoft.com> Signed-off-by: Garima Singh <garima.singh@microsoft.com> Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-03-30bloom.c: core Bloom filter implementation for changed paths.Libravatar Garima Singh1-0/+20
Add the core implementation for computing Bloom filters for the paths changed between a commit and it's first parent. We fill the Bloom filters as (const char *data, int len) pairs as `struct bloom_filters" within a commit slab. Filters for commits with no changes and more than 512 changes, is represented with a filter of length zero. There is no gain in distinguishing between a computed filter of length zero for a commit with no changes, and an uncomputed filter for new commits or for commits with more than 512 changes. The effect on `git log -- path` is the same in both cases. We will fall back to the normal diffing algorithm when we can't benefit from the existence of Bloom filters. Helped-by: Jeff King <peff@peff.net> Helped-by: Derrick Stolee <dstolee@microsoft.com> Reviewed-by: Jakub Narębski <jnareb@gmail.com> Signed-off-by: Garima Singh <garima.singh@microsoft.com> Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-03-30bloom.c: introduce core Bloom filter constructsLibravatar Garima Singh1-0/+48
Introduce the constructs for Bloom filters, Bloom filter keys and Bloom filter settings. For details on what Bloom filters are and how they work, refer to Dr. Derrick Stolee's blog post [1]. It provides a concise explanation of the adoption of Bloom filters as described in [2] and [3]. Implementation specifics: 1. We currently use 7 and 10 for the number of hashes and the size of each entry respectively. They served as great starting values, the mathematical details behind this choice are described in [1] and [4]. The implementation, while not completely open to it at the moment, is flexible enough to allow for tweaking these settings in the future. Note: The performance gains we have observed with these values are significant enough that we did not need to tweak these settings. The performance numbers are included in the cover letter of this series and in the commit message of the subsequent commit where we use Bloom filters to speed up `git log -- path`. 2. As described in [1] and [3], we do not need 7 independent hashing functions. We use the Murmur3 hashing scheme, seed it twice and then combine those to procure an arbitrary number of hash values. 3. The filters will be sized according to the number of changes in each commit, in multiples of 8 bit words. [1] Derrick Stolee "Supercharging the Git Commit Graph IV: Bloom Filters" https://devblogs.microsoft.com/devops/super-charging-the-git-commit-graph-iv-Bloom-filters/ [2] Flavio Bonomi, Michael Mitzenmacher, Rina Panigrahy, Sushil Singh, George Varghese "An Improved Construction for Counting Bloom Filters" http://theory.stanford.edu/~rinap/papers/esa2006b.pdf https://doi.org/10.1007/11841036_61 [3] Peter C. Dillinger and Panagiotis Manolios "Bloom Filters in Probabilistic Verification" http://www.ccs.neu.edu/home/pete/pub/Bloom-filters-verification.pdf https://doi.org/10.1007/978-3-540-30494-4_26 [4] Thomas Mueller Graf, Daniel Lemire "Xor Filters: Faster and Smaller Than Bloom and Cuckoo Filters" https://arxiv.org/abs/1912.08258 Helped-by: Derrick Stolee <dstolee@microsoft.com> Reviewed-by: Jakub Narębski <jnareb@gmail.com> Signed-off-by: Garima Singh <garima.singh@microsoft.com> Signed-off-by: Junio C Hamano <gitster@pobox.com>
2020-03-30bloom.c: add the murmur3 hash implementationLibravatar Garima Singh1-0/+13
In preparation for computing changed paths Bloom filters, implement the Murmur3 hash algorithm as described in [1]. It hashes the given data using the given seed and produces a uniformly distributed hash value. [1] https://en.wikipedia.org/wiki/MurmurHash#Algorithm Helped-by: Derrick Stolee <dstolee@microsoft.com> Helped-by: Szeder Gábor <szeder.dev@gmail.com> Reviewed-by: Jakub Narębski <jnareb@gmail.com> Signed-off-by: Garima Singh <garima.singh@microsoft.com> Signed-off-by: Junio C Hamano <gitster@pobox.com>