Age | Commit message (Collapse) | Author | Files | Lines |
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Add a repository argument to allow callers of is_repository_shallow
to be more specific about which repository to handle. This is a small
mechanical change; it doesn't change the implementation to handle
repositories other than the_repository yet.
As with the previous commits, use a macro to catch callers passing a
repository other than the_repository at compile time.
Signed-off-by: Stefan Beller <sbeller@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Add a repository argument to allow callers of register_shallow
to be more specific about which repository to handle. This is a small
mechanical change; it doesn't change the implementation to handle
repositories other than the_repository yet.
As with the previous commits, use a macro to catch callers passing a
repository other than the_repository at compile time.
Signed-off-by: Stefan Beller <sbeller@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Add a repository argument to allow callers of set_alternate_shallow_file
to be more specific about which repository to handle. This is a small
mechanical change; it doesn't change the implementation to handle
repositories other than the_repository yet.
As with the previous commits, use a macro to catch callers passing a
repository other than the_repository at compile time.
Signed-off-by: Stefan Beller <sbeller@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Add a repository argument to allow callers of lookup_commit_graft to
be more specific about which repository to handle. This is a small
mechanical change; it doesn't change the implementation to handle
repositories other than the_repository yet.
As with the previous commits, use a macro to catch callers passing a
repository other than the_repository at compile time.
Signed-off-by: Jonathan Nieder <jrnieder@gmail.com>
Signed-off-by: Stefan Beller <sbeller@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Add a repository argument to allow callers of register_commit_graft to
be more specific about which repository to handle. This is a small
mechanical change; it doesn't change the implementation to handle
repositories other than the_repository yet.
As with the previous commits, use a macro to catch callers passing a
repository other than the_repository at compile time.
Signed-off-by: Jonathan Nieder <jrnieder@gmail.com>
Signed-off-by: Stefan Beller <sbeller@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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We have to convert all of the alloc functions at once, because alloc_report
uses a funky macro for reporting. It is better for the sake of mechanical
conversion to convert multiple functions at once rather than changing the
structure of the reporting function.
We record all memory allocation in alloc.c, and free them in
clear_alloc_state, which is called for all repositories except
the_repository.
Signed-off-by: Stefan Beller <sbeller@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Convert the definitions and declarations of commit_tree and
commit_tree_extended to use struct object_id and adjust all usages of
these functions.
Signed-off-by: Patryk Obara <patryk.obara@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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API clean-up around revision traversal.
* rs/lose-leak-pending:
commit: remove unused function clear_commit_marks_for_object_array()
revision: remove the unused flag leak_pending
checkout: avoid using the rev_info flag leak_pending
bundle: avoid using the rev_info flag leak_pending
bisect: avoid using the rev_info flag leak_pending
object: add clear_commit_marks_all()
ref-filter: use clear_commit_marks_many() in do_merge_filter()
commit: use clear_commit_marks_many() in remove_redundant()
commit: avoid allocation in clear_commit_marks_many()
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Signed-off-by: Rene Scharfe <l.s.r@web.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Create header for pretty.c to make formatting interface more structured.
This is a middle point, this file would be merged further with other
files which contain formatting stuff.
Signed-off-by: Olga Telezhnaia <olyatelezhnaya@gmail.com>
Mentored-by: Christian Couder <christian.couder@gmail.com>
Mentored by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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We currently have seven callers of `reduce_heads(foo)`. Six of them do
not use the original list `foo` again, and actually, all six of those
end up leaking it.
Introduce and use `reduce_heads_replace(&foo)` as a leak-free version of
`foo = reduce_heads(foo)` to fix several of these. Fix the remaining
leaks using `free_commit_list()`.
While we're here, document `reduce_heads()` and mark it as `extern`.
Signed-off-by: Martin Ågren <martin.agren@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Conversion from uchar[20] to struct object_id continues; this is to
ensure that we do not assume sizeof(struct object_id) is the same
as the length of SHA-1 hash (or length of longest hash we support).
* po/read-graft-line:
commit: rewrite read_graft_line
commit: allocate array using object_id size
commit: replace the raw buffer with strbuf in read_graft_line
sha1_file: fix definition of null_sha1
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Code clean-up.
* rs/commit-h-single-parent-cleanup:
commit: remove unused inline function single_parent()
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53b2c823f6 (revision walker: mini clean-up) added the function in 2007,
but it was never used, so we should be able to get rid of it now.
Signed-off-by: Rene Scharfe <l.s.r@web.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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This simplifies function declaration and allows for use of strbuf_rtrim
instead of modifying buffer directly.
Signed-off-by: Patryk Obara <patryk.obara@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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With this patch, commit.h doesn't contain the string 'sha1' any more.
Signed-off-by: Stefan Beller <sbeller@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Conversion from uchar[20] to struct object_id continues.
* bc/object-id: (53 commits)
object: convert parse_object* to take struct object_id
tree: convert parse_tree_indirect to struct object_id
sequencer: convert do_recursive_merge to struct object_id
diff-lib: convert do_diff_cache to struct object_id
builtin/ls-tree: convert to struct object_id
merge: convert checkout_fast_forward to struct object_id
sequencer: convert fast_forward_to to struct object_id
builtin/ls-files: convert overlay_tree_on_cache to object_id
builtin/read-tree: convert to struct object_id
sha1_name: convert internals of peel_onion to object_id
upload-pack: convert remaining parse_object callers to object_id
revision: convert remaining parse_object callers to object_id
revision: rename add_pending_sha1 to add_pending_oid
http-push: convert process_ls_object and descendants to object_id
refs/files-backend: convert many internals to struct object_id
refs: convert struct ref_update to use struct object_id
ref-filter: convert some static functions to struct object_id
Convert struct ref_array_item to struct object_id
Convert the verify_pack callback to struct object_id
Convert lookup_tag to struct object_id
...
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Convert lookup_commit, lookup_commit_or_die,
lookup_commit_reference, and lookup_commit_reference_gently to take
struct object_id arguments.
Introduce a temporary in parse_object buffer in order to convert this
function. This is required since in order to convert parse_object and
parse_object_buffer, lookup_commit_reference_gently and
lookup_commit_or_die would need to be converted. Not introducing a
temporary would therefore require that lookup_commit_or_die take a
struct object_id *, but lookup_commit would take unsigned char *,
leaving a confusing and hard-to-use interface.
parse_object_buffer will lose this temporary in a later patch.
This commit was created with manual changes to commit.c, commit.h, and
object.c, plus the following semantic patch:
@@
expression E1, E2;
@@
- lookup_commit_reference_gently(E1.hash, E2)
+ lookup_commit_reference_gently(&E1, E2)
@@
expression E1, E2;
@@
- lookup_commit_reference_gently(E1->hash, E2)
+ lookup_commit_reference_gently(E1, E2)
@@
expression E1;
@@
- lookup_commit_reference(E1.hash)
+ lookup_commit_reference(&E1)
@@
expression E1;
@@
- lookup_commit_reference(E1->hash)
+ lookup_commit_reference(E1)
@@
expression E1;
@@
- lookup_commit(E1.hash)
+ lookup_commit(&E1)
@@
expression E1;
@@
- lookup_commit(E1->hash)
+ lookup_commit(E1)
@@
expression E1, E2;
@@
- lookup_commit_or_die(E1.hash, E2)
+ lookup_commit_or_die(&E1, E2)
@@
expression E1, E2;
@@
- lookup_commit_or_die(E1->hash, E2)
+ lookup_commit_or_die(E1, E2)
Signed-off-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Convert register_shallow and unregister_shallow to take struct
object_id. register_shallow is a caller of lookup_commit, which we will
convert later. It doesn't make sense for the registration and
unregistration functions to have incompatible interfaces, so convert
them both.
Signed-off-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Git's source code assumes that unsigned long is at least as precise as
time_t. Which is incorrect, and causes a lot of problems, in particular
where unsigned long is only 32-bit (notably on Windows, even in 64-bit
versions).
So let's just use a more appropriate data type instead. In preparation
for this, we introduce the new `timestamp_t` data type.
By necessity, this is a very, very large patch, as it has to replace all
timestamps' data type in one go.
As we will use a data type that is not necessarily identical to `time_t`,
we need to be very careful to use `time_t` whenever we interact with the
system functions, and `timestamp_t` everywhere else.
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Since this structure handles an array of object IDs, rename it to struct
oid_array. Also rename the accessor functions and the initialization
constant.
This commit was produced mechanically by providing non-Documentation
files to the following Perl one-liners:
perl -pi -E 's/struct sha1_array/struct oid_array/g'
perl -pi -E 's/\bsha1_array_/oid_array_/g'
perl -pi -E 's/SHA1_ARRAY_INIT/OID_ARRAY_INIT/g'
Signed-off-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Code clean-up.
* rs/log-email-subject:
pretty: use fmt_output_email_subject()
log-tree: factor out fmt_output_email_subject()
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Add the email-style subject prefix (e.g. "Subject: [PATCH] ") directly
when it's needed instead of letting log_write_email_headers() prepare
it in a static buffer in advance. This simplifies storage ownership and
code flow.
Signed-off-by: Rene Scharfe <l.s.r@web.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Make ignore_non_trailer take a buf/len pair instead of struct strbuf.
Signed-off-by: Jonathan Tan <jonathantanmy@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The existing "git fetch --depth=<n>" option was hard to use
correctly when making the history of an existing shallow clone
deeper. A new option, "--deepen=<n>", has been added to make this
easier to use. "git clone" also learned "--shallow-since=<date>"
and "--shallow-exclude=<tag>" options to make it easier to specify
"I am interested only in the recent N months worth of history" and
"Give me only the history since that version".
* nd/shallow-deepen: (27 commits)
fetch, upload-pack: --deepen=N extends shallow boundary by N commits
upload-pack: add get_reachable_list()
upload-pack: split check_unreachable() in two, prep for get_reachable_list()
t5500, t5539: tests for shallow depth excluding a ref
clone: define shallow clone boundary with --shallow-exclude
fetch: define shallow boundary with --shallow-exclude
upload-pack: support define shallow boundary by excluding revisions
refs: add expand_ref()
t5500, t5539: tests for shallow depth since a specific date
clone: define shallow clone boundary based on time with --shallow-since
fetch: define shallow boundary with --shallow-since
upload-pack: add deepen-since to cut shallow repos based on time
shallow.c: implement a generic shallow boundary finder based on rev-list
fetch-pack: use a separate flag for fetch in deepening mode
fetch-pack.c: mark strings for translating
fetch-pack: use a common function for verbose printing
fetch-pack: use skip_prefix() instead of starts_with()
upload-pack: move rev-list code out of check_non_tip()
upload-pack: make check_non_tip() clean things up on error
upload-pack: tighten number parsing at "deepen" lines
...
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When "git merge-recursive" works on history with many criss-cross
merges in "verbose" mode, the names the command assigns to the
virtual merge bases could have overwritten each other by unintended
reuse of the same piece of memory.
* rs/pull-signed-tag:
commit: use FLEX_ARRAY in struct merge_remote_desc
merge-recursive: fix verbose output for multiple base trees
commit: factor out set_merge_remote_desc()
commit: use xstrdup() in get_merge_parent()
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Convert the name member of struct merge_remote_desc to a FLEX_ARRAY and
use FLEX_ALLOC_STR to build the struct. This halves the number of
memory allocations, saves the storage for a pointer and avoids an
indirection when reading the name.
Suggested-by: Jeff King <peff@peff.net>
Signed-off-by: Rene Scharfe <l.s.r@web.de>
Reviewed-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Export a helper function for allocating, populating and attaching a
merge_remote_desc to a commit.
Signed-off-by: Rene Scharfe <l.s.r@web.de>
Reviewed-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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A helper function that takes the contents of a commit object and
finds its subject line did not ignore leading blank lines, as is
commonly done by other codepaths. Make it ignore leading blank
lines to match.
* js/find-commit-subject-ignore-leading-blanks:
reset --hard: skip blank lines when reporting the commit subject
sequencer: use skip_blank_lines() to find the commit subject
commit -C: skip blank lines at the beginning of the message
commit.c: make find_commit_subject() more robust
pretty: make the skip_blank_lines() function public
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Code clean-up to avoid using a variable string that compilers may
feel untrustable as printf-style format given to write_file()
helper function.
* jk/printf-format:
commit.c: remove print_commit_list()
avoid using sha1_to_hex output as printf format
walker: let walker_say take arbitrary formats
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A helper function that takes the contents of a commit object and
finds its subject line did not ignore leading blank lines, as is
commonly done by other codepaths. Make it ignore leading blank
lines to match.
* js/find-commit-subject-ignore-leading-blanks:
reset --hard: skip blank lines when reporting the commit subject
sequencer: use skip_blank_lines() to find the commit subject
commit -C: skip blank lines at the beginning of the message
commit.c: make find_commit_subject() more robust
pretty: make the skip_blank_lines() function public
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The helper function tries to offer a way to conveniently show the
last one differently from others, presumably to allow you to say
something like
A, B, and C.
while iterating over a list that has these three elements.
However, there is only one caller, and it passes the same format
string "%s\n" for both the last one and the other ones. Retire the
helper function and update the caller with a simplified version.
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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"log --graph --format=" learned that "%>|(N)" specifies the width
relative to the terminal's left edge, not relative to the area to
draw text that is to the right of the ancestry-graph section. It
also now accepts negative N that means the column limit is relative
to the right border.
* nd/graph-width-padded:
pretty.c: support <direction>|(<negative number>) forms
pretty: pass graph width to pretty formatting for use in '%>|(N)'
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This function will be used also in the find_commit_subject()
function.
While at it, rename the function to reflect that it skips not only
empty lines, but any lines consisting of only whitespace, too.
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Pass graph width to pretty formatting, to make N in '%>|(N)'
include columns consumed by graph rendered when --graph option
is in use.
For example, in the output of
git log --all --graph --pretty='format: [%>|(20)%h] %ar%d'
this change will make all commit hashes align at 20th column from
the edge of the terminal, not from the edge of the graph.
Signed-off-by: Josef Kufner <josef@kufner.cz>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Instead of a custom commit walker like get_shallow_commits(), this new
function uses rev-list to mark NOT_SHALLOW to all reachable commits,
except borders. The definition of reachable is to be defined by the
protocol later. This makes it more flexible to define shallow boundary.
The way we find border is paint all reachable commits NOT_SHALLOW. Any
of them that "touches" commits without NOT_SHALLOW flag are considered
shallow (e.g. zero parents via grafting mechanism). Shallow commits and
their true parents are all marked SHALLOW. Then NOT_SHALLOW is removed
from shallow commits at the end.
There is an interesting observation. With a generic walker, we can
produce all kinds of shallow cutting. In the following graph, every
commit but "x" is reachable. "b" is a parent of "a".
x -- a -- o
/ /
x -- c -- b -- o
After this function is run, "a" and "c" are both considered shallow
commits. After grafting occurs at the client side, what we see is
a -- o
/
c -- b -- o
Notice that because of grafting, "a" has zero parents, so "b" is no
longer a parent of "a".
This is unfortunate and may be solved in two ways. The first is change
the way shallow grafting works and keep "a -- b" connection if "b"
exists and always ends at shallow commits (iow, no loose ends). This is
hard to detect, or at least not cheap to do.
The second way is mark one "x" as shallow commit instead of "a" and
produce this graph at client side:
x -- a -- o
/ /
c -- b -- o
More commits, but simpler grafting rules.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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This output format prevents format-patch output from breaking
readers if somebody copy+pasted an mbox into a commit message.
Unlike the traditional "mboxo" format, "mboxrd" is designed to
be fully-reversible. "mboxrd" also gracefully degrades to
showing extra ">" in existing "mboxo" readers.
This degradation is preferable to breaking message splitting
completely, a problem I've seen in "mboxcl" due to having
multiple, non-existent, or inaccurate Content-Length headers.
"mboxcl2" is a non-starter since it's inherits the problems
of "mboxcl" while being completely incompatible with existing
tooling based around mailsplit.
ref: http://homepage.ntlworld.com/jonathan.deboynepollard/FGA/mail-mbox-formats.html
Signed-off-by: Eric Wong <e@80x24.org>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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When the local convention of the project is to use tab width that is
not 8, it may make sense to allow "git log --expand-tabs=<n>" to
tweak the output to match it.
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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A commit log message sometimes tries to line things up using tabs,
assuming fixed-width font with the standard 8-place tab settings.
Viewing such a commit however does not work well in "git log", as
we indent the lines by prefixing 4 spaces in front of them.
This should all line up:
Column 1 Column 2
-------- --------
A B
ABCD EFGH
SPACES Instead of Tabs
Even with multi-byte UTF8 characters:
Column 1 Column 2
-------- --------
Ä B
åäö 100
A Møøse once bit my sister..
Tab-expand the lines in "git log --expand-tabs" output before
prefixing 4 spaces.
This is based on the patch by Linus Torvalds, but at this step, we
require an explicit command line option to enable the behaviour.
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Teach "git log" and friends a new "--date=format:..." option to
format timestamps using system's strftime(3).
* jk/date-mode-format:
strbuf: make strbuf_addftime more robust
introduce "format" date-mode
convert "enum date_mode" into a struct
show-branch: use DATE_RELATIVE instead of magic number
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"git verify-tag" and "git verify-commit" have been taught to share
more code, and then learned to optionally show the verification
message from the underlying GPG implementation.
* bc/gpg-verify-raw:
verify-tag: add option to print raw gpg status information
verify-commit: add option to print raw gpg status information
gpg: centralize printing signature buffers
gpg: centralize signature check
verify-commit: add test for exit status on untrusted signature
verify-tag: share code with verify-commit
verify-tag: add tests
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In preparation for adding date modes that may carry extra
information beyond the mode itself, this patch converts the
date_mode enum into a struct.
Most of the conversion is fairly straightforward; we pass
the struct as a pointer and dereference the type field where
necessary. Locations that declare a date_mode can use a "{}"
constructor. However, the tricky case is where we use the
enum labels as constants, like:
show_date(t, tz, DATE_NORMAL);
Ideally we could say:
show_date(t, tz, &{ DATE_NORMAL });
but of course C does not allow that. Likewise, we cannot
cast the constant to a struct, because we need to pass an
actual address. Our options are basically:
1. Manually add a "struct date_mode d = { DATE_NORMAL }"
definition to each caller, and pass "&d". This makes
the callers uglier, because they sometimes do not even
have their own scope (e.g., they are inside a switch
statement).
2. Provide a pre-made global "date_normal" struct that can
be passed by address. We'd also need "date_rfc2822",
"date_iso8601", and so forth. But at least the ugliness
is defined in one place.
3. Provide a wrapper that generates the correct struct on
the fly. The big downside is that we end up pointing to
a single global, which makes our wrapper non-reentrant.
But show_date is already not reentrant, so it does not
matter.
This patch implements 3, along with a minor macro to keep
the size of the callers sane.
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Recent "git prune" traverses young unreachable objects to safekeep
old objects in the reachability chain from them, which sometimes
caused error messages that are unnecessarily alarming.
* jk/squelch-missing-link-warning-for-unreachable:
suppress errors on missing UNINTERESTING links
silence broken link warnings with revs->ignore_missing_links
add quieter versions of parse_{tree,commit}
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verify-commit and verify-tag both share a central codepath for verifying
commits: check_signature. However, verify-tag exited successfully for
untrusted signature, while verify-commit exited unsuccessfully.
Centralize this signature check and make verify-commit adopt the older
verify-tag behavior. This behavior is more logical anyway, as the
signature is in fact valid, whether or not there's a path of trust to
the author.
Signed-off-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Recent "git prune" traverses young unreachable objects to safekeep
old objects in the reachability chain from them, which sometimes
caused error messages that are unnecessarily alarming.
* jk/squelch-missing-link-warning-for-unreachable:
suppress errors on missing UNINTERESTING links
silence broken link warnings with revs->ignore_missing_links
add quieter versions of parse_{tree,commit}
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When we call parse_commit, it will complain to stderr if the
object does not exist or cannot be read. This means that we
may produce useless error messages if this situation is
expected (e.g., because the object is marked UNINTERESTING,
or because revs->ignore_missing_links is set).
We can fix this by adding a new "parse_X_gently" form that
takes a flag to suppress the messages. The existing
"parse_X" form is already gentle in the sense that it
returns an error rather than dying, and we could in theory
just add a "quiet" flag to it (with existing callers passing
"0"). But doing it this way means we do not have to disturb
existing callers.
Note also that the new flag is "quiet_on_missing", and not
just "quiet". We could add a flag to suppress _all_ errors,
but besides being a more invasive change (we would have to
pass the flag down to sub-functions, too), there is a good
reason not to: we would never want to use it. Missing a
linked object is expected in some circumstances, but it is
never expected to have a malformed commit, or to get a tree
when we wanted a commit. We should always complain about
these corruptions.
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Identify parts of the code that knows that we use SHA-1 hash to
name our objects too much, and use (1) symbolic constants instead
of hardcoded 20 as byte count and/or (2) use struct object_id
instead of unsigned char [20] for object names.
* bc/object-id:
apply: convert threeway_stage to object_id
patch-id: convert to use struct object_id
commit: convert parts to struct object_id
diff: convert struct combine_diff_path to object_id
bulk-checkin.c: convert to use struct object_id
zip: use GIT_SHA1_HEXSZ for trailers
archive.c: convert to use struct object_id
bisect.c: convert leaf functions to use struct object_id
define utility functions for object IDs
define a structure for object IDs
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Convert struct commit_graft and necessary local parts of commit.c.
Also, convert several constants based on the hex length of an SHA-1 to
use GIT_SHA1_HEXSZ, and move several magic constants into variables for
readability.
Signed-off-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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No external callers exist.
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The get_merge_bases*() API was easy to misuse by careless
copy&paste coders, leaving object flags tainted in the commits that
needed to be traversed.
* jc/merge-bases:
get_merge_bases(): always clean-up object flags
bisect: clean flags after checking merge bases
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